Structure Database (LMSD)

Common Name
PCTR2
Systematic Name
16R-(S-cysteinylglycinyl)-17S-hydroxy-4Z,7Z,10Z,12E,14E,19Z-docosahexaenoic acid
Synonyms
  • Protectin Conjugates in Tissue Regeneration 2
LM ID
LMFA04040005
Formula
Exact Mass
Calculate m/z
520.26071
Status
Curated

Classification

Biological Context

Protein conjugates in tissue regeneration 2 (PCTR2) is a specialized pro-resolving mediator (SPM) synthesized from docosahexaenoic acid (DHA).1,2 DHA is oxidized to 16S,17S-epoxy-protectin, which is converted to PCTR1 by glutathione S-transferase and to PCTR2 via γ-glutamyl transpeptidase.1 PCTR2 is found in resolving mouse exudate and in both M1 and M2 macrophages differentiated from isolated human monocytes.3,4

This information has been provided by Cayman Chemical

References

3. Rodriguez, A.R., and Spur, B.W. Total synthesis of pro-resolving and tissue-regenerative protectin sulfido-conjugates. Tetrahedron Lett. 56(42), 5811-5815 (2015).

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Homo sapiens (#9606)
Mammalia (#40674)
Total synthesis of pro-resolving and tissue-regenerative Protectin sulfido-conjugates,
Tetrahedron Letts, 2015

String Representations

InChiKey (Click to copy)
WUKLNYKELYBPSU-WRSKGJTLSA-N
InChi (Click to copy)
InChI=1S/C27H40N2O6S/c1-2-3-14-17-23(30)24(36-21-22(28)27(35)29-20-26(33)34)18-15-12-10-8-6-4-5-7-9-11-13-16-19-25(31)32/h3,5-8,10-15,18,22-24,30H,2,4,9,16-17,19-21,28H2,1H3,(H,29,35)(H,31,32)(H,33,34)/b7-5-,8-6-,12-10+,13-11-,14-3-,18-15+/t22-,23-,24+/m0/s1
SMILES (Click to copy)
C(CC/C=C\C/C=C\C/C=C\C=C\C=C\[C@@H](SC[C@@H](C(=O)NCC(O)=O)N)[C@@H](O)C/C=C\CC)(=O)O

Other Databases

PubChem CID
Cayman ID

Calculated Physicochemical Properties

Heavy Atoms 36
Rings 0
Aromatic Rings 0
Rotatable Bonds 20
Van der Waals Molecular Volume 545.15
Topological Polar Surface Area 149.95
Hydrogen Bond Donors 5
Hydrogen Bond Acceptors 8
logP 5.19
Molar Refractivity 149.24

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Created at
21st Sep 2020
Updated at
21st Sep 2020